DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mat1 and mnat-1

DIOPT Version :9

Sequence 1:NP_610605.1 Gene:Mat1 / 36130 FlyBaseID:FBgn0024956 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001379975.1 Gene:mnat-1 / 173602 WormBaseID:WBGene00018769 Length:310 Species:Caenorhabditis elegans


Alignment Length:323 Identity:115/323 - (35%)
Similarity:178/323 - (55%) Gaps:37/323 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFLKGSGACPECMVPLRRNNFRVQLFEDPMVEK 70
            |.:||:.:|.|..|.:|:|.|||.||::|||.:|...||.|..|...||:||||.|::|||:::|
 Worm     4 CKKCKSNEYTNKQLVMMINECGHPLCKNCVDNIFALNSGNCHVCNRVLRKNNFREQIYEDPLIDK 68

  Fly    71 EVDIRRRILRDYNKREEDFASLAEYNDYLEEIEDIVYNLCNNIDIIETNKRIEAYKRDNREVIQR 135
            |..:||::.:.||.:::||.:|.|:.||.|..|.:||||....::.|||..|:|::..::|.|.|
 Worm    69 ETFLRRKLRKIYNLKQDDFENLREFGDYQERFETVVYNLVFETNVNETNAEIQAFEEKHKEQIDR 133

  Fly   136 NKTRVGRDEYALEEMLELEKVQEEARRKELEELENEHKKKKA----RDKQALIEELMYSGKDA-- 194
            ||.|:..|:..:|:.|..|:..   :.:..:.:|.:.|:::|    .|.:.:::||..|...|  
 Worm   134 NKRRLDDDQKWIEDQLREERAM---KARMTDHMEMDAKEQEAASAVTDTRKIMDELRDSNVAAEV 195

  Fly   195 -------AQIVTEFAEKAE---KQREEEKQLPPPKPANE---FSTGIKFGQTADPSLLPVPKSEE 246
                   .||..|..||.|   ::|..::.|...|.|.|   |:|.|:..               
 Worm   196 ILDRERKKQIEKELEEKEEQEKRKRRNKEMLQTRKRAAENMSFNTVIRVA--------------- 245

  Fly   247 GPLFVYEPLVPFSEGPAMPPTNEIVSRGYIAHIRAETPQENAGGFTSALACERALQEALQGLY 309
            |..:|::||.....||.||..:||.:.||:||||..|.:..|||:|..|.|.|||.||...|:
 Worm   246 GRAYVHQPLELVINGPPMPNVSEIEALGYLAHIRQPTAEYIAGGYTPMLGCSRALFEARIDLF 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mat1NP_610605.1 cdk7 1..313 CDD:129661 115/323 (36%)
RING 3..47 CDD:302633 19/40 (48%)
CDC37_N 66..175 CDD:296150 36/108 (33%)
Seryl_tRNA_N 127..215 CDD:299883 25/103 (24%)
mnat-1NP_001379975.1 cdk7 4..310 CDD:129661 115/323 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166991
Domainoid 1 1.000 109 1.000 Domainoid score I4026
eggNOG 1 0.900 - - E1_COG5220
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1821
Inparanoid 1 1.050 200 1.000 Inparanoid score I2477
Isobase 1 0.950 - 0 Normalized mean entropy S1402
OMA 1 1.010 - - QHG55364
OrthoDB 1 1.010 - - D1454155at2759
OrthoFinder 1 1.000 - - FOG0005635
OrthoInspector 1 1.000 - - oto18455
orthoMCL 1 0.900 - - OOG6_103797
Panther 1 1.100 - - LDO PTHR12683
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1502
SonicParanoid 1 1.000 - - X5285
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

Return to query results.
Submit another query.