DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7220 and UBC14

DIOPT Version :9

Sequence 1:NP_001097261.1 Gene:CG7220 / 36129 FlyBaseID:FBgn0033544 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001190096.1 Gene:UBC14 / 824704 AraportID:AT3G55380 Length:201 Species:Arabidopsis thaliana


Alignment Length:188 Identity:55/188 - (29%)
Similarity:78/188 - (41%) Gaps:58/188 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NSRWERRLHKELMSLIKEPPPGVT---IDTESVQQNLSEWKINIKGFEGTLYEGEDFQLLFKFNN 101
            |::....|.|:|..|.|:|..|.:   :|    ::|:.:|.::|.|...|||||..|..:..|..
plant     3 NNQASLLLQKQLKDLCKKPVDGFSAGLVD----EKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPE 63

  Fly   102 KYPFDSPEVTFIGTNIPVHPHVYSNGHICLSIL-------------TEDWSPA------------ 141
            .||...|.|||  |:...||:|||:|.:|:|||             :|.|:|.            
plant    64 NYPVSPPTVTF--TSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTLVETDMFCSI 126

  Fly   142 LSVQSVC----------------------LSIASMLSSCREKKRPPDNTIYVKTCNKN 177
            ||:.|.|                      |||.||||...::.  |.|....|....|
plant   127 LSLYSDCFSNVRGIYKSGLRNTLEDKSIVLSIISMLSGPNDES--PANVEAAKEWRDN 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7220NP_001097261.1 UQ_con 46..187 CDD:278603 54/182 (30%)
UBC14NP_001190096.1 COG5078 19..197 CDD:227410 50/172 (29%)
UQ_con 19..194 CDD:278603 50/172 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.