DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7220 and Ube2c

DIOPT Version :9

Sequence 1:NP_001097261.1 Gene:CG7220 / 36129 FlyBaseID:FBgn0033544 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_081061.1 Gene:Ube2c / 68612 MGIID:1915862 Length:179 Species:Mus musculus


Alignment Length:143 Identity:51/143 - (35%)
Similarity:75/143 - (52%) Gaps:17/143 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RRLHKELMSLIKEPPPGVTIDTESVQQNLSEWKINIKGFEGTLYEGEDFQLLFKFNNKYPFDSPE 109
            :||.:|||.|:.....|::...||  .||.:|...|.|..||:||...::|..:|.:.||:::|.
Mouse    33 KRLQQELMILMTSGDKGISAFPES--DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPT 95

  Fly   110 VTFIGTNIP-VHPHVYSNGHICLSILTEDWSPALSVQSVCLSIASMLSSCREKKRP----PDNTI 169
            |.|:   .| .||:|.:.|:|||.||.:.||....|:::.|||.|:|.      .|    |.|| 
Mouse    96 VKFL---TPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLG------EPNIDSPLNT- 150

  Fly   170 YVKTCNKNPKKTK 182
            :.....|||...|
Mouse   151 HAAELWKNPTAFK 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7220NP_001097261.1 UQ_con 46..187 CDD:278603 51/142 (36%)
Ube2cNP_081061.1 UQ_con 34..170 CDD:306648 51/142 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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