DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7220 and Ubc87F

DIOPT Version :9

Sequence 1:NP_001097261.1 Gene:CG7220 / 36129 FlyBaseID:FBgn0033544 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster


Alignment Length:123 Identity:39/123 - (31%)
Similarity:63/123 - (51%) Gaps:16/123 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LHKELMSLIKEPPPGVTIDTESVQQNLSEWKINIKGFEGTLYEGEDFQLLFKFNNKYPFDSPEVT 111
            |:::|..|.:.|..|.:....| ..::.:|::.|.|...|||||..|:....|..:||...|::.
  Fly    10 LNRQLSELQRHPVEGFSAGLVS-DSDIFKWEVVIIGPPDTLYEGGFFKAHLIFPKEYPLRPPKMK 73

  Fly   112 FIGTNIPVHPHVYSNGHICLSIL-------------TEDWSPALSVQSVCLSIASMLS 156
            || |.| .||::...|.:|:|||             .|.|.|..:|:::.||:.|||:
  Fly    74 FI-TEI-WHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETILLSVISMLT 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7220NP_001097261.1 UQ_con 46..187 CDD:278603 39/123 (32%)
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 39/123 (32%)
UQ_con 10..160 CDD:278603 39/123 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438089
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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