DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7220 and Ube2t

DIOPT Version :9

Sequence 1:NP_001097261.1 Gene:CG7220 / 36129 FlyBaseID:FBgn0033544 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001101814.2 Gene:Ube2t / 360847 RGDID:1310816 Length:204 Species:Rattus norvegicus


Alignment Length:151 Identity:47/151 - (31%)
Similarity:72/151 - (47%) Gaps:22/151 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RLHKELMSLIKEPPPGVTIDTESVQQNLSEWKINIKGFEGTLYEGEDFQLLFKFNNKYPFDSPEV 110
            ||.|||..|..|||||||...|  :..:...:..|.|...|.||...|.|......:|||:.|::
  Rat     6 RLKKELHMLAIEPPPGVTCWQE--KDKMDNLRAQILGGANTPYEKGIFTLEVIVPERYPFEPPQI 68

  Fly   111 TFIGTNIPV-HPHVYSNGHICLSIL----TEDWSPALSVQSVCLSIASMLSSCREKKRPPDNTIY 170
            .|:   .|: ||::.|:|.|||.||    ...|.|:|::.:|..||..:::     :..||:.:.
  Rat    69 RFL---TPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMA-----EPNPDDPLM 125

  Fly   171 VKTCNKNP-------KKTKWW 184
            ....::..       ||.:.|
  Rat   126 ADISSEFKYNKIAFVKKARQW 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7220NP_001097261.1 UQ_con 46..187 CDD:278603 47/151 (31%)
Ube2tNP_001101814.2 UBCc 5..147 CDD:238117 47/151 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.