DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7220 and lwr

DIOPT Version :10

Sequence 1:NP_724964.2 Gene:CG7220 / 36129 FlyBaseID:FBgn0033544 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_476978.1 Gene:lwr / 33226 FlyBaseID:FBgn0010602 Length:159 Species:Drosophila melanogaster


Alignment Length:152 Identity:43/152 - (28%)
Similarity:74/152 - (48%) Gaps:25/152 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RLHKELMSLIKEPP----------PGVTIDTESVQQNLSEWKINIKGFEGTLYEGEDFQLLFKFN 100
            ||.:|..:..|:.|          |..|:       ||..|:..|.|.:.|.:||..::|...|.
  Fly     8 RLGEERKAWRKDHPFGFVARPAKNPDGTL-------NLMIWECAIPGKKSTPWEGGLYKLRMIFK 65

  Fly   101 NKYPFDSPEVTFIGTNIPV-HPHVYSNGHICLSILTE--DWSPALSVQSVCLSIASMLS--SCRE 160
            :.||...|:..|   ..|: ||:||.:|.:|||:|.|  ||.||::::.:.|.|..:|:  :.::
  Fly    66 DDYPTSPPKCKF---EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNIKD 127

  Fly   161 KKRPPDNTIYVKTCNKNPKKTK 182
            ..:....|||.:...:..|:.:
  Fly   128 PAQAEAYTIYCQNRLEYEKRVR 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7220NP_724964.2 UBCc_UBE2W 44..164 CDD:467428 39/132 (30%)
lwrNP_476978.1 UBCc_UBE2I 4..155 CDD:467418 43/152 (28%)

Return to query results.
Submit another query.