DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7220 and Ube2c

DIOPT Version :9

Sequence 1:NP_001097261.1 Gene:CG7220 / 36129 FlyBaseID:FBgn0033544 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001100012.1 Gene:Ube2c / 296368 RGDID:1305382 Length:179 Species:Rattus norvegicus


Alignment Length:139 Identity:50/139 - (35%)
Similarity:75/139 - (53%) Gaps:9/139 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RRLHKELMSLIKEPPPGVTIDTESVQQNLSEWKINIKGFEGTLYEGEDFQLLFKFNNKYPFDSPE 109
            :||.:|||:|:.....|::...||  .||.:|...|.|..||:||...::|..:|.:.||:::|.
  Rat    33 KRLQQELMTLMMSGDKGISAFPES--DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPT 95

  Fly   110 VTFIGTNIP-VHPHVYSNGHICLSILTEDWSPALSVQSVCLSIASMLSSCREKKRPPDNTIYVKT 173
            |.|:   .| .||:|.:.|:|||.||.:.||....|:::.|||.|:|.  ......|.|| :...
  Rat    96 VKFL---TPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLG--EPNIESPLNT-HAAE 154

  Fly   174 CNKNPKKTK 182
            ..|||...|
  Rat   155 LWKNPTAFK 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7220NP_001097261.1 UQ_con 46..187 CDD:278603 50/138 (36%)
Ube2cNP_001100012.1 COG5078 33..172 CDD:227410 50/139 (36%)
UQ_con 34..170 CDD:278603 50/138 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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