DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12338 and daao-1

DIOPT Version :9

Sequence 1:NP_001286292.1 Gene:CG12338 / 36128 FlyBaseID:FBgn0033543 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_500234.3 Gene:daao-1 / 3565775 WormBaseID:WBGene00022076 Length:322 Species:Caenorhabditis elegans


Alignment Length:339 Identity:114/339 - (33%)
Similarity:181/339 - (53%) Gaps:43/339 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VLGSGIIGLTTALELQKEFPTARVSVIADRFNEDTVSYVAAGIFRPGTSFM--GPTQKITQQWMT 67
            |||:||.|:.:||.:|:..|...|::||::|:.:|.|.||||:..|   |:  ....:|. .|.:
 Worm     6 VLGAGINGIASALAIQERLPNCEVTIIAEKFSPNTTSDVAAGLIEP---FLCDDDVDRII-NWTS 66

  Fly    68 DAFNYWDELRRSKEAPLAGVCQLSGYIYS--RTSP---SIVRN-HFI--EKLLPVYRRATEEELR 124
            ...:...|.:....   .|..:.|||...  ::.|   .:::| |.:  .::..|.||...    
 Worm    67 ATISRIHEYQADGN---PGAEEQSGYWLQSVKSEPKWLKLMKNVHILTDAEMKQVARRPEH---- 124

  Fly   125 LCNGGWKYGSFFTTCLTESRLFLPYATKKFLENGGEVVRQHVNSFFEVPQNIDLLLNCTGMGAKE 189
                  |:|.|:||...|...::.:.|.|||:|||:..:|.:.:..:|.::.|:.:||||:|::.
 Worm   125 ------KFGIFYTTWYLEPTPYIKWCTDKFLKNGGKFKKQKIENIDDVARSYDVTVNCTGLGSRA 183

  Fly   190 LCGDQHLVPIRGQVLKVRAPWVKTAFYGDYDTYVLPGFETVTLGG---CRQFD-SYNTEWCKYDS 250
            |.||:.:.|.|||:|||..|.|| .|:.|...|.|....|:||||   ..|:| :.|:|   ...
 Worm   184 LIGDKEVYPTRGQILKVSCPRVK-HFFIDDKYYALLNDSTITLGGTFEAHQWDLTINSE---LSQ 244

  Fly   251 MAIRERCYDLLPSLRKAEIVRECVGLRPHRSVVRVEPELITNPEGRRLKVVHNYGHGGYGVTTAP 315
            ..::|..:: :||||.|:|:...|.:||.|..||::.||     ||.|  ||||||||.|:|...
 Worm   245 KILKENIHN-IPSLRTAQILSSHVDMRPSRGTVRLQAEL-----GRSL--VHNYGHGGSGITLHW 301

  Fly   316 GTAMYAVRLVRDLL 329
            |.|:....:|.::|
 Worm   302 GCALECAEIVENVL 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12338NP_001286292.1 DAO 5..324 CDD:279590 112/332 (34%)
daao-1NP_500234.3 DAO 3..310 CDD:279590 112/332 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0665
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H101531
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4799
OMA 1 1.010 - - QHG63703
OrthoDB 1 1.010 - - D1363414at2759
OrthoFinder 1 1.000 - - FOG0001083
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100720
Panther 1 1.100 - - O PTHR11530
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R881
SonicParanoid 1 1.000 - - X916
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.810

Return to query results.
Submit another query.