DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12338 and ddo-3

DIOPT Version :9

Sequence 1:NP_001286292.1 Gene:CG12338 / 36128 FlyBaseID:FBgn0033543 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_498453.1 Gene:ddo-3 / 184746 WormBaseID:WBGene00017648 Length:383 Species:Caenorhabditis elegans


Alignment Length:349 Identity:99/349 - (28%)
Similarity:160/349 - (45%) Gaps:32/349 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHFGVLGSGIIGLTTA---LEL--QKEFPTARVSVIADRFNEDTVSYVAAGIFRPGTSFMGPTQK 60
            :...|:|.|:|||:||   |:|  ::..|...:.:...:..|..:|...||:||     :....:
 Worm    18 LRVAVVGEGVIGLSTATAILDLAEKRNIPAPEIHIFHHKPFEKILSRHIAGLFR-----IDSGSE 77

  Fly    61 ITQQWMTDAF----NYWDELRRSKEAPLAGVCQLSGYIY--SRTSPSIVRNHFIEKLLPVYRRAT 119
            |.:::..|.|    ..|.|.     ..|:||..:||:|.  |:|.....|..: ..|:..||...
 Worm    78 IDRKYGYDTFEKLATLWREY-----GGLSGVQLVSGHILSDSKTKLDSQRESY-GSLVYNYRDLA 136

  Fly   120 EEEL-------RLCNGGWKYGSFFTTCLTESRLFLPYATKKFLENGGEVVRQHVNSFFEVPQNID 177
            |.||       .|.......|..:|...:|...|.|:..|:.:..|....::.:.:..|:....|
 Worm   137 EPELFGPTSLFDLPRNTTTRGIHYTAYTSEGLRFCPFLKKELMTKGVRFTQRRIGNLEELGAEFD 201

  Fly   178 LLLNCTGMGAKELCGDQ--HLVPIRGQVLKVRAPWVKTAFYGDYDTYVLPGFETVTLGGCRQFDS 240
            :::|..|:....|.||.  ::.||||.:::|.|||.|...|.|:.|..:|..:.|.:|..:|..:
 Worm   202 VVVNSAGLLGGVLAGDDAGNMKPIRGVLIRVDAPWQKHFLYRDFSTITIPVIDHVYMGTVKQEGA 266

  Fly   241 YN-TEWCKYDSMAIRERCYDLLPSLRKAEIVRECVGLRPHRSVVRVEPELITNPEGRRLKVVHNY 304
            :. ......|...|..|...|.||.::..::...||.||.|..||||.::......::..|||||
 Worm   267 FGPNNVTSADIQDITSRYVALQPSFKRVHMLSSFVGYRPGRKQVRVEKQIRETNGSKKFTVVHNY 331

  Fly   305 GHGGYGVTTAPGTAMYAVRLVRDL 328
            ||.|.|.|...|:|::|..:|.||
 Worm   332 GHSGNGFTLGYGSAVHAAHIVLDL 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12338NP_001286292.1 DAO 5..324 CDD:279590 96/339 (28%)
ddo-3NP_498453.1 DAO 19..351 CDD:279590 96/342 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167177
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0665
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4799
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1363414at2759
OrthoFinder 1 1.000 - - FOG0001083
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100720
Panther 1 1.100 - - O PTHR11530
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.660

Return to query results.
Submit another query.