DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12338 and ddo-2

DIOPT Version :9

Sequence 1:NP_001286292.1 Gene:CG12338 / 36128 FlyBaseID:FBgn0033543 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001370668.1 Gene:ddo-2 / 179130 WormBaseID:WBGene00017565 Length:334 Species:Caenorhabditis elegans


Alignment Length:343 Identity:104/343 - (30%)
Similarity:166/343 - (48%) Gaps:38/343 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VLGSGIIGLTTALELQKEFPTARVSVIADRFNEDTVSYVAAGIFRPGTSFMGPTQKITQQWMTD- 68
            ::|.|:||.|:||::.|..|.|:::|:.|:..:.:.|...||:||           |..:..|: 
 Worm    10 IIGEGVIGCTSALQISKAIPNAKITVLHDKPFKKSCSAGPAGLFR-----------IDYEENTEY 63

  Fly    69 ---AFNYWDELRRSKEAPLAGVCQLSGYIYS----------RTSPSIVRN-HFIEKLLPVYRRAT 119
               :|.::..|.|:.:....||..:||:|.|          |....||.| .|::         .
 Worm    64 GRASFAWFSHLYRTTKGSETGVKLVSGHIQSDNLESLKQQQRAYGDIVYNFRFLD---------D 119

  Fly   120 EEELRLCNGGWKYGSFFTTCLTESRLFLPYATKKFLENGGEVVRQHVNSFFEVPQ-NIDLLLNCT 183
            .|.|.:.....|:...:|...:|...::||.....||...|..:|.|.|...|.. ..|:::||.
 Worm   120 RERLDIFPEPSKHCIHYTAYASEGNKYVPYLKNLLLEQKIEFKQQEVTSLDAVADAGYDVIVNCA 184

  Fly   184 GMGAKELCGDQH-LVPIRGQVLKVRAPWVKTAFYGDYDTYVLPGFETVTLGGCRQFDSYNTEWCK 247
            |:...:|.||.. ..||||.:|:|.|||.|...|.|:.|:.:|...:|.:|..:|.:.::.|...
 Worm   185 GLYGGKLAGDDDTCYPIRGVILEVDAPWHKHFNYRDFTTFTIPKEHSVVVGSTKQDNRWDLEITD 249

  Fly   248 YDSMAIRERCYDLLPSLRKAEIVRECVGLRPHRSVVRVEPELITN-PEGRRLKVVHNYGHGGYGV 311
            .|...|.:|...|.|.:|:.:|::|...|||.|..||:|.:..|: ...:...|||:||||..|.
 Worm   250 EDRNDILKRYIALHPGMREPKIIKEWSALRPGRKHVRIEAQKRTSVGNSKDYMVVHHYGHGSNGF 314

  Fly   312 TTAPGTAMYAVRLVRDLL 329
            |...|||:.|.:||:..|
 Worm   315 TLGWGTAIEATKLVKTAL 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12338NP_001286292.1 DAO 5..324 CDD:279590 101/336 (30%)
ddo-2NP_001370668.1 DAO 7..327 CDD:396016 101/336 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167178
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4799
OMA 1 1.010 - - QHG63703
OrthoDB 1 1.010 - - D1363414at2759
OrthoFinder 1 1.000 - - FOG0001083
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100720
Panther 1 1.100 - - O PTHR11530
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.810

Return to query results.
Submit another query.