Protein Alignment Rab3 and Rab6a

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: XP_038948673.1
• Gene: Rab6a / 84379
• RGDID: 619737
• Length: 211
• Species: Rattus norvegicus
• Alignment Length: 219
• Identity: 80/219 - (36%)
• Similarity: 120/219 - (54%)
• Gaps: 39/219 - (17%)

  Fly     1 MASGGD---PKWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKT 62
            |::|||   |..:           |||:.:|..||||||.:.|:..|||.:.:.:|:||||..||
  Rat     1 MSAGGDFGNPLRK-----------FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKT 54

  Fly    63 VFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNA 127
            ::..|:.|:||:||||||||:|::..:|.|.:...:::||:||.:||.....|:..::|....:.
  Rat    55 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDV 119

  Fly   128 QVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAV------------------ 174
            .::|||||.|:.|:|.:|.|.|.:.|.:|.|.|.|||||...|||.:
  Rat   120 IIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLPTIASHLRTQGCSQYLTV 184

  Fly   175 ----FERLVDIICDKMSESLDADP 194
                .:.|..|.|   ||||..:|
  Rat   185 ALNCSDSLRKINC---SESLRKEP 205

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	70/185 (38%)
Rab6a	XP_038948673.1	Rab6	14..173	CDD:206654	67/158 (42%)