Protein Alignment Rab3 and RABA3

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_171628.2
• Gene: RABA3 / 839493
• AraportID: AT1G01200
• Length: 237
• Species: Arabidopsis thaliana
• Alignment Length: 233
• Identity: 85/233 - (36%)
• Similarity: 134/233 - (57%)
• Gaps: 16/233 - (6%)

  Fly     3 SGGDPK----WQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV 63
            ||..|:    .:|....:..||:||:::||:|:||||..|.|:..:.|.....||:|::|:.:|:
plant     6 SGESPENNKHVKKPTMPEKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTI 70

  Fly    64 FRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQ 128
            ....|.||.||||||||||||.:|:||||||:|.:::||:|...||:.|..||.:::.::.|:|.
plant    71 TLRGKLVKAQIWDTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAV 135

  Fly   129 VILVGNKCDME-DQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVD------IICDKM 186
            ::|||||.|:. .:|.:..|...:.|:...:.|.|.||....||...|.||::      ::..|.
plant   136 IMLVGNKADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKA 200

  Fly   187 SESLDADPTLVGGGQKGQRLTDQPQGTPN----ANCNC 220
            .|| |...|:...|.:...::.....|.|    |:|:|
plant   201 MES-DGGATVKLDGSRIDVISGSDLETSNIKEQASCSC 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	68/170 (40%)
RABA3	NP_171628.2	Rab11_like	26..191	CDD:206660	70/164 (43%)