Protein Alignment Rab3 and RAB11c

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_172434.1
• Gene: RAB11c / 837490
• AraportID: AT1G09630
• Length: 217
• Species: Arabidopsis thaliana
• Alignment Length: 208
• Identity: 78/208 - (37%)
• Similarity: 131/208 - (62%)
• Gaps: 2/208 - (0%)

  Fly    15 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAG 79
            |:.:||:||:::||:|.|||::.|.|:..:.|.....||:|::|..:|:....:.||.|||||||
plant     6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAG 70

  Fly    80 QERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVI 144
            |||||.||:||||||:|.:|:||||...:|.:|..|:.:::.::..|..::|:|||.|::..|.:
plant    71 QERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAV 135

  Fly   145 SFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMS-ESLDADPTLVGGG-QKGQRLT 207
            :.|..:..|::.|:.|.||||.|.:||:..|:.::..:...:| :|:.:|.|..... ::||.:.
plant   136 ATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANANIKEGQTID 200

  Fly   208 DQPQGTPNANCNC 220
            .......||...|
plant   201 VAATSESNAKKPC 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	66/163 (40%)
RAB11c	NP_172434.1	P-loop containing Nucleoside Triphosphate Hydrolases	1..216	CDD:476819	78/208 (38%)