Protein Alignment Rab3 and RABA4a

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_201330.1
• Gene: RABA4a / 836652
• AraportID: AT5G65270
• Length: 226
• Species: Arabidopsis thaliana
• Alignment Length: 234
• Identity: 92/234 - (39%)
• Similarity: 139/234 - (59%)
• Gaps: 25/234 - (10%)

  Fly     1 MASG---GDPKWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKT 62
            |.||   |||       .|..||:||:::||:|:|||:..|.|||.|.|:....:|:|::|:.:|
plant     1 MTSGGGYGDP-------SQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRT 58

  Fly    63 VFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNA 127
            :....|.||.||||||||||||.:|:||||||:|.:|:||:|...:|:.:..|:.:::.::..|.
plant    59 LVIDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNI 123

  Fly   128 QVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFER-LVDI--ICDKMSES 189
            .:||:|||.|:.|||.|..|..::.|::.|:.|.||||....||::.|.. |.:|  |.:|.|.:
plant   124 VIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLA 188

  Fly   190 LDAD-----PTLVGGGQKGQRLTDQP---QGTPNANCNC 220
            ...|     |    |...|:::...|   |..||.:..|
plant   189 ASEDQENGNP----GSLAGKKIDIVPGPGQVIPNKSNMC 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	72/166 (43%)
RABA4a	NP_201330.1	Rab11_like	15..179	CDD:206660	72/163 (44%)