Protein Alignment Rab3 and RABH1a

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001190616.1
• Gene: RABH1a / 836623
• AraportID: AT5G64990
• Length: 213
• Species: Arabidopsis thaliana
• Alignment Length: 206
• Identity: 64/206 - (31%)
• Similarity: 110/206 - (53%)
• Gaps: 7/206 - (3%)

  Fly    22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW-------DTAG 79
            :||:.:|:..|||||.:..:....|.:::.:|:||||..||....|:..:||:|       ||||
plant     8 YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWYKKLSLGDTAG 72

  Fly    80 QERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVI 144
            |||::::..:|.|.:...:::|||.::.||.:...|:.:::........::|||||.|:.::|.:
plant    73 QERFKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGNKTDLVNKRQV 137

  Fly   145 SFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLVGGGQKGQRLTDQ 209
            |.|.|...|.:.|..|.|||||...|:|.:|.::...:....:.|......||....|....:.|
plant   138 SIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQEDLVDVNLKPLMFSSQ 202

  Fly   210 PQGTPNANCNC 220
            ......:||:|
plant   203 ANHQQESNCSC 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	56/169 (33%)
RABH1a	NP_001190616.1	Rab6	8..175	CDD:206654	56/166 (34%)