Protein Alignment Rab3 and RHA1

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001330210.1
• Gene: RHA1 / 834549
• AraportID: AT5G45130
• Length: 208
• Species: Arabidopsis thaliana
• Alignment Length: 197
• Identity: 68/197 - (34%)
• Similarity: 103/197 - (52%)
• Gaps: 12/197 - (6%)

  Fly    25 LIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTA 89
            :::|:...||:|.:.|:..|.|.....||:|..|..:|:..:|..||.:||||||||||.::...
plant    22 VLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 86

  Fly    90 YYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLAD 154
            |||||...|:::|:||:.||...:.||.:::.....|..:.|.|||.|:.|.|.:|.|.....|.
plant    87 YYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIYAQ 151

  Fly   155 QLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDAD-PTLVGGGQKGQRLTDQPQGTPNANC 218
            :..:.|.|||||...|||.:|..    |..::.....|: ||       |..|.:.|..|..::.
plant   152 ENSLFFMETSAKTATNVKDIFYE----IAKRLPRVQPAENPT-------GMVLPNGPGATAVSSS 205

  Fly   219 NC 220
            .|
plant   206 CC 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	60/159 (38%)
RHA1	NP_001330210.1	Rab5_related	22..180	CDD:206653	60/161 (37%)