Protein Alignment Rab3 and RABB1C

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_193450.1
• Gene: RABB1C / 827428
• AraportID: AT4G17170
• Length: 211
• Species: Arabidopsis thaliana
• Alignment Length: 209
• Identity: 75/209 - (35%)
• Similarity: 121/209 - (57%)
• Gaps: 15/209 - (7%)

  Fly    17 NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
            ::.|:||.:|||::.|||:..|.::.|..|......|:|::|..:.:...:|.:|||||||||||
plant     2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQE 66

  Fly    82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISF 146
            .:|:||.:|||||.|.:|:||:|..::||.:..|:...:.::..|..::|:|||||:..:|.:|.
plant    67 SFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVST 131

  Fly   147 ERGRQLADQLGVEFFETSAKENVNVK--------AVFERLVDIICDKMSESLDADPTLVG----- 198
            |.|.|.|.:.|:.|.|.|||...||:        .:::::.|.:.|..:||........|
plant   132 EEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIKVGYGGIPGPS 196

  Fly   199 GGQKGQRLTDQPQG 212
            ||:.|.  |.|..|
plant   197 GGRDGS--TSQGGG 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	64/171 (37%)
RABB1C	NP_193450.1	PLN03108	1..210	CDD:178655	75/209 (36%)