Protein Alignment Rab3 and rab5d

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001025576.1
• Gene: rab5d / 594964
• XenbaseID: XB-GENE-489496
• Length: 213
• Species: Xenopus tropicalis
• Alignment Length: 174
• Identity: 63/174 - (36%)
• Similarity: 104/174 - (59%)
• Gaps: 4/174 - (2%)

  Fly    22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTI 86
            |||:::|:.:|||:|.:.|:....|.....:|:|..|..::|...|..||.:||||||||||.::
 Frog    20 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSL 84

  Fly    87 TTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQ 151
            ...|||||...|:::|:|..::|:..:.||.:::..:..|..:.|.|||.|:.::|::.:|..:.
 Frog    85 APMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLAEKRMVEYEEAQA 149

  Fly   152 LADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPT 195
            .|:..|:.|.|||||..:||..:|.    .|..||.:|...:||
 Frog   150 YAEDTGLLFMETSAKTAMNVNELFL----AIAKKMPKSDAQNPT 189

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	58/162 (36%)
rab5d	NP_001025576.1	Rab5_related	19..181	CDD:206653	59/164 (36%)