DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab3 and RAB13

DIOPT Version :10

Sequence 1:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_002861.1 Gene:RAB13 / 5872 HGNCID:9762 Length:203 Species:Homo sapiens


Alignment Length:202 Identity:93/202 - (46%)
Similarity:138/202 - (68%) Gaps:13/202 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 82
            :|::||||:||:|.||||..:.|:|:|:|.:.::||:|||||::||....|::|||:||||||||
Human     5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 69

  Fly    83 YRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFE 147
            ::||||||||||||.||:||:|:|.||.::|:|:..||..:....:.:|:|||||||.:|.:..|
Human    70 FKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKE 134

  Fly   148 RGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLVGGGQKGQRLTDQPQG 212
            :..:||.:.|:.|||||||.::||            |:...||..|..|..||::... .::|..
Human   135 QADKLAREHGIRFFETSAKSSMNV------------DEAFSSLARDILLKSGGRRSGN-GNKPPS 186

  Fly   213 TPNANCN 219
            |....|:
Human   187 TDLKTCD 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab3NP_523687.1 Rab3 21..185 CDD:206657 82/163 (50%)
RAB13NP_002861.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 87/177 (49%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 6/13 (46%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 14/16 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..203 5/22 (23%)

Return to query results.
Submit another query.