DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab3 and Rab37

DIOPT Version :10

Sequence 1:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_067386.3 Gene:Rab37 / 58222 MGIID:1929945 Length:223 Species:Mus musculus


Alignment Length:175 Identity:80/175 - (45%)
Similarity:117/175 - (66%) Gaps:1/175 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASGGDPKWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTS-AFVSTVGIDFKVKTVFR 65
            |..|:...:......|:|...|::::|:|.||||.||.::.|.:|.| .|::||||||:.|.|..
Mouse    10 AGDGEAPERSPPFSPNYDLTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTV 74

  Fly    66 HDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVI 130
            ...||||||||||||||:|::|.||||.|...:|:||:||:.||::::.|:|:|..|:..:..::
Mouse    75 DGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIM 139

  Fly   131 LVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVF 175
            |:|||.|:..:|||..|.|..||.:.||.|.|||||..:||:..|
Mouse   140 LLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAF 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab3NP_523687.1 Rab3 21..185 CDD:206657 76/156 (49%)
Rab37NP_067386.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 2/11 (18%)
Rab26 31..220 CDD:206695 76/154 (49%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 52..67 7/14 (50%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 85..102 12/16 (75%)

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