Protein Alignment Rab3 and rab1aa

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001313450.1
• Gene: rab1aa / 566914
• ZFINID: ZDB-GENE-090312-110
• Length: 201
• Species: Danio rerio
• Alignment Length: 202
• Identity: 89/202 - (44%)
• Similarity: 137/202 - (67%)
• Gaps: 7/202 - (3%)

  Fly    18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 82
            :||:||||:||:|.|||:..|.|:|||::|.:::||:|:|||::|:....|.:||||||||||||
Zfish     5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69

  Fly    83 YRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFE 147
            :||||::|||||.|.|::||||:::|||:|:.|:.:|..|:.:|...:|||||||:..::|:.:.
Zfish    70 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYT 134

  Fly   148 RGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLVGGGQKGQ-RLTDQPQ 211
            ..::.||.|.:.|.|||||.:.||:..|..:...|..:|.      |....|.:|.. ::...|.
Zfish   135 AAKEFADSLSIPFLETSAKSSTNVEQAFMTMAAEIKKRMG------PGATAGAEKSNLKIHSTPV 193

  Fly   212 GTPNANC 218
            .|.:..|
Zfish   194 KTSSGGC 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	80/163 (49%)
rab1aa	NP_001313450.1	Rab1_Ypt1	7..172	CDD:206661	81/164 (49%)