Protein Alignment Rab3 and rab6ba

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001029351.1
• Gene: rab6ba / 558900
• ZFINID: ZDB-GENE-050809-136
• Length: 215
• Species: Danio rerio
• Alignment Length: 224
• Identity: 80/224 - (35%)
• Similarity: 118/224 - (52%)
• Gaps: 47/224 - (20%)

  Fly    22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDK-------RVKLQIWDTAG 79
            |||:.:|..||||||.:.|:..|||.:.:.:|:||||..||::..|:       :.:||:|||||
Zfish    14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTLGVSDLQARLQLWDTAG 78

  Fly    80 QERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVI 144
            |||:|::..:|.|.:...:::||:||.:||.....|:..::|....:..::|||||.|:.|:|.|
Zfish    79 QERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQI 143

  Fly   145 SFERGRQLADQLGVEFFETSAKENVNVKAVFER------------------LVDIICDKMSESLD 191
            :.|.|.|.|.:|.|.|.|||||...|||.:|.|                  ::||..||..|
Zfish   144 TIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESMQETSKEGMIDIKLDKPQE--- 205

  Fly   192 ADPTLVGGGQKGQRLTDQPQGTPNANCNC 220
             .||..||                  |:|
Zfish   206 -PPTTEGG------------------CSC 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	71/187 (38%)
rab6ba	NP_001029351.1	Rab6	14..181	CDD:206654	69/166 (42%)