Protein Alignment Rab3 and rab3b

DIOPT Version :9

• Sequence 1: NP_001356961.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: XP_685654.3
• Gene: rab3b / 557482
• ZFINID: ZDB-GENE-050208-660
• Length: 217
• Species: Danio rerio
• Alignment Length: 218
• Identity: 166/218 - (76%)
• Similarity: 190/218 - (87%)
• Gaps: 2/218 - (0%)

  Fly     1 MASGGDPKWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFR 65
            ||.......|:|.:||||||||||||||||||||||||||||||||:|:||||||||||||||:|
Zfish     1 MAKADQRFGQRDGSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFSSSFVSTVGIDFKVKTVYR 65

  Fly    66 HDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVI 130
            :||||||||||||||||||||||||||||||||||||:|||:|:|:||||.||||||||||||||
Zfish    66 NDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESYNAVQDWATQIKTYSWDNAQVI 130

  Fly   131 LVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPT 195
            ||||||||:::||:.||:|:.||||||.|::|.|||||:||:.||||||||||.||||.:|.:|.
Zfish   131 LVGNKCDMDEERVVPFEKGKHLADQLGFEYYEASAKENINVRQVFERLVDIICVKMSERVDVEPP 195

  Fly   196 LVGGGQKGQRLTDQPQGTPNANC 218
            :|.|. |..||||:|...|. ||
Zfish   196 MVTGA-KTTRLTDKPPQLPQ-NC 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_001356961.1	Rab3	21..185	CDD:206657	139/163 (85%)
rab3b	XP_685654.3	P-loop_NTPase	21..185	CDD:304359	139/163 (85%)
		RAB	22..182	CDD:197555	135/159 (85%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D503770at33208
OrthoFinder	1	1.000	-	-		FOG0000908
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR47980
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X578
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	5.020