Protein Alignment Rab3 and rab23

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001018579.1
• Gene: rab23 / 553778
• ZFINID: ZDB-GENE-050522-328
• Length: 237
• Species: Danio rerio
• Alignment Length: 207
• Identity: 65/207 - (31%)
• Similarity: 111/207 - (53%)
• Gaps: 14/207 - (6%)

  Fly    15 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAG 79
            :::.:...|::::||.:|||:|.:.||....||..:..|:|:||..:.:..:.:.|:|.:|||||
Zfish     3 EEDMEVAIKVVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIIVNGEDVRLMLWDTAG 67

  Fly    80 QERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVI 144
            ||.:..||.||||||...:|::..|:.:||.::..|..:::....| ...:||.||.|:.|..||
Zfish    68 QEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWKEKVEMEVGD-IPTVLVQNKIDLLDDTVI 131

  Fly   145 SFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLV------------ 197
            ..|....||.:|.:.|:.||.||::||..||:.|.|....::.:....:..::
Zfish   132 KNEEAEGLAKRLKLRFYRTSVKEDLNVNEVFKYLADKYLQRLKQQSAEETDIIHTSSNKIGVFNT 196

  Fly   198 -GGGQKGQRLTD 208
             |.|...|..:|
Zfish   197 TGSGHPNQNSSD 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	61/163 (37%)
rab23	NP_001018579.1	Rab23_like	22..169	CDD:133306	56/147 (38%)