Protein Alignment Rab3 and rab23

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001016964.1
• Gene: rab23 / 549718
• XenbaseID: XB-GENE-492626
• Length: 238
• Species: Xenopus tropicalis
• Alignment Length: 235
• Identity: 75/235 - (31%)
• Similarity: 118/235 - (50%)
• Gaps: 31/235 - (13%)

  Fly    15 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAG 79
            :::.:...|::::||.:|||:|.:.||....||..:..|:|:||..:.:..:|:.|:|.:|||||
 Frog     3 EEDMEVAIKVVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQLNDEDVRLMLWDTAG 67

  Fly    80 QERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVI 144
            ||.:..||.||||||...:|::..|:.:||.::..|..::.....| ...:||.||.|:.|:.||
 Frog    68 QEEFDAITKAYYRGAQACVLVFSTTDRESFETIPSWREKVVAEVGD-IPTVLVQNKIDLLDETVI 131

  Fly   145 SFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLV------------ 197
            ..|....||.:|.:.|:.||.||::||..||:.|.|....::......|..:|
 Frog   132 KNEEAEALAKRLKLRFYRTSVKEDLNVTEVFKYLADKYLQRLKRQTAEDNEVVHTTSNKIGVFNT 196

  Fly   198 -GGGQKGQR------------LTDQPQGT-----PNANCN 219
             ||...||:            |....|.|     |..|||
 Frog   197 AGGSHSGQKTNGLNGSGDVINLRPNKQRTKKTKSPFTNCN 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	62/163 (38%)
rab23	NP_001016964.1	Rab23_like	22..169	CDD:133306	57/147 (39%)