Protein Alignment Rab3 and rab3a

DIOPT Version :9

• Sequence 1: NP_001356961.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001016426.1
• Gene: rab3a / 549180
• XenbaseID: XB-GENE-489999
• Length: 220
• Species: Xenopus tropicalis
• Alignment Length: 222
• Identity: 174/222 - (78%)
• Similarity: 199/222 - (89%)
• Gaps: 4/222 - (1%)

  Fly     1 MASGGDPKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVF 64
            |||..|.:: ||:::|||||||||:|||||||||||||||||||||||.||||||||||||||::
 Frog     1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIY 65

  Fly    65 RHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQV 129
            |:|||:||||||||||||||||||||||||||||||||:|||:|||:||||.|||||||||||||
 Frog    66 RNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV 130

  Fly   130 ILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLD-AD 193
            :||||||||||:||:|.|||||||:.||.||||.|||:|:|||..|||||||||:||||||| ||
 Frog   131 LLVGNKCDMEDERVVSSERGRQLAEHLGFEFFEASAKDNINVKQTFERLVDIICEKMSESLDTAD 195

  Fly   194 PTLVGGGQKGQRLTDQPQGTPNANCNC 220
            |. |.|.::|.:|||| |..|:.:|.|
 Frog   196 PA-VTGAKQGPQLTDQ-QAPPHQDCAC 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_001356961.1	Rab3	21..185	CDD:206657	141/163 (87%)
rab3a	NP_001016426.1	Rab3	22..186	CDD:206657	141/163 (87%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	292	1.000	Domainoid score	I1494
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	344	1.000	Inparanoid score	I2269
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D503770at33208
OrthoFinder	1	1.000	-	-		FOG0000908
OrthoInspector	1	1.000	-	-		otm48236
Panther	1	1.100	-	-	O	PTHR47980
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2742
SonicParanoid	1	1.000	-	-		X578
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	10	10.100