DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab3 and RAB9B

DIOPT Version :10

Sequence 1:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_057454.1 Gene:RAB9B / 51209 HGNCID:14090 Length:201 Species:Homo sapiens


Alignment Length:163 Identity:54/163 - (33%)
Similarity:94/163 - (57%) Gaps:4/163 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRT 85
            :.|::::|:..|||:|.:.||..:.|.|....|:|::|..:.:....:.|.|||||||||||:::
Human     7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKS 71

  Fly    86 ITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYS----WDNAQVILVGNKCDMEDQRVISF 146
            :.|.:||||...:|.:.|.:..||.::.:|..:...|:    .::...:::|||.|.||::|.:.
Human    72 LRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDKEDRQVTTE 136

  Fly   147 ERGRQLADQLGVEFFETSAKENVNVKAVFERLV 179
            |......:.....:.|||||::.||...||..|
Human   137 EAQTWCMENGDYPYLETSAKDDTNVTVAFEEAV 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab3NP_523687.1 Rab3 21..185 CDD:206657 54/163 (33%)
RAB9BNP_057454.1 Rab9 3..172 CDD:206697 54/163 (33%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P51151 31..42 3/10 (30%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P51151 64..78 6/13 (46%)

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