Protein Alignment Rab3 and rab3d

DIOPT Version :9

• Sequence 1: NP_001356961.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001005621.1
• Gene: rab3d / 448064
• XenbaseID: XB-GENE-490391
• Length: 216
• Species: Xenopus tropicalis
• Alignment Length: 221
• Identity: 164/221 - (74%)
• Similarity: 189/221 - (85%)
• Gaps: 6/221 - (2%)

  Fly     1 MASGGDPKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVF 64
            |||..|.:. |||||||:||||||||||||||||||||||||||||||||||||||||||||||:
 Frog     1 MASANDTRQPQKDAADQSFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVY 65

  Fly    65 RHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQV 129
            |::||||||||||||||||||||||||||||||:||||::|.:|||:||||.|||||||||||||
 Frog    66 RNEKRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDISNLESFNAVQDWATQIKTYSWDNAQV 130

  Fly   130 ILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADP 194
            :|||||||:||.|||..|.||:||::||.||||.|||:|:|||.||||||||||:||:|||:..|
 Frog   131 LLVGNKCDLEDDRVIPAEDGRKLAEELGFEFFEASAKDNINVKQVFERLVDIICEKMNESLENGP 195

  Fly   195 TLVGGGQKGQRLTDQPQGTPNANCNC 220
            ...|..|..:....:     ::||:|
 Frog   196 VPSGTAQLSESAPKE-----HSNCSC 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_001356961.1	Rab3	21..185	CDD:206657	139/163 (85%)
rab3d	NP_001005621.1	Rab3	22..186	CDD:206657	139/163 (85%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	292	1.000	Domainoid score	I1494
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	344	1.000	Inparanoid score	I2269
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1218073at2759
OrthoFinder	1	1.000	-	-		FOG0000908
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR47980
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2742
SonicParanoid	1	1.000	-	-		X578
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	9	9.100