DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rab3 and rab1a

DIOPT Version :9

Sequence 1:	NP_001356961.1	Gene:	Rab3 / 36127	FlyBaseID:	FBgn0005586	Length:	220	Species:	Drosophila melanogaster
Sequence 2:	NP_001004787.1	Gene:	rab1a / 448007	XenbaseID:	XB-GENE-485527	Length:	204	Species:	Xenopus tropicalis

Alignment Length:	201	Identity:	90/201 - (44%)
Similarity:	137/201 - (68%)	Gaps:	5/201 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly    18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 82
            :||:||||:||:|.|||:..|.|:|||::|.:::||:|:|||::|:....|.:||||||||||||
Frog     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72

  Fly    83 YRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFE 147
            :||||::|||||.|.|::||||:::|||:|:.|:.:|..|:.:|...:|||||||:..::|:.:.
Frog    73 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYT 137

  Fly   148 RGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLVGGGQKGQRLTDQPQG 212
            ..::.||.||:.|.|||||...||:..|..:...|..:|.....|     ||.:|..::...|..
Frog   138 TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATA-----GGQEKNVKIQSTPVK 197

  Fly   213 TPNANC 218
            ..:..|
Frog   198 QSSGGC 203

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_001356961.1	Rab3	21..185	CDD:206657	81/163 (50%)
rab1a	NP_001004787.1	Rab1_Ypt1	10..175	CDD:206661	82/164 (50%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910