Protein Alignment Rab3 and rab1bb

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001002129.2
• Gene: rab1bb / 415219
• ZFINID: ZDB-GENE-040625-133
• Length: 201
• Species: Danio rerio
• Alignment Length: 185
• Identity: 88/185 - (47%)
• Similarity: 133/185 - (71%)
• Gaps: 6/185 - (3%)

  Fly    18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 82
            :||:||||:||:|.|||:..|.|:|||::|.:|:||:|:|||::|:....|.:||||||||||||
Zfish     5 YDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69

  Fly    83 YRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFE 147
            :||||::|||||.|.|::||||:::|:|:|:.|:.:|..|:.:|...:|||||||:..::|:.:.
Zfish    70 FRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVGNKCDLTTKKVVDYT 134

  Fly   148 RGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLVGGGQK 202
            ..::.||.||:.|.|||||...||:..|..:.:.|..:|.      |...||.:|
Zfish   135 TAKEFADSLGIPFLETSAKNATNVEQAFMTMAEEIKKRMR------PGASGGSEK 183

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	81/163 (50%)
rab1bb	NP_001002129.2	Rab1_Ypt1	7..172	CDD:206661	82/164 (50%)