Protein Alignment Rab3 and rab5b

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_998050.1
• Gene: rab5b / 405821
• ZFINID: ZDB-GENE-040426-2593
• Length: 214
• Species: Danio rerio
• Alignment Length: 197
• Identity: 68/197 - (34%)
• Similarity: 110/197 - (55%)
• Gaps: 6/197 - (3%)

  Fly    22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTI 86
            |||:::|:.:|||:|.:.|:....|.....:|:|..|..::|...|..||.:||||||||||.::
Zfish    21 FKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTAGQERYHSL 85

  Fly    87 TTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQ 151
            ...|||||...|:::|:|..::|...:.||.:::..:..|..:.|.|||.|:.|:|::.:|..:.
Zfish    86 APMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADLADKRLVEYEEAQT 150

  Fly   152 LADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLVGGGQKGQRLTDQPQGTPNA 216
            .|:..|:.|.|||||..:||..:|.    .|..||.::...:|| .....:|..|.| |......
Zfish   151 YAEDTGLLFMETSAKTAMNVNELFL----AIAKKMPKTDTQNPT-HAARHRGVNLQD-PDAQSTR 209

  Fly   217 NC 218
            :|
Zfish   210 SC 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	59/162 (36%)
rab5b	NP_998050.1	Rab5_related	20..182	CDD:206653	60/164 (37%)