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Protein Alignment Rab3 and rab35
DIOPT Version :9
Sequence 1: | NP_001356961.1 |
Gene: | Rab3 / 36127 |
FlyBaseID: | FBgn0005586 |
Length: | 220 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_989019.1 |
Gene: | rab35 / 394615 |
XenbaseID: | XB-GENE-489018 |
Length: | 201 |
Species: | Xenopus tropicalis |
Alignment Length: | 175 |
Identity: | 81/175 - (46%) |
Similarity: | 132/175 - (75%) |
Gaps: | 1/175 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQ 80
:::|::|||||||:|.|||:|.|.|:||::|:.::::|:|:|||::||..:.::|||||||||||
Frog 3 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67
Fly 81 ERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVIS 145
||:||||:.||||..|.|::||||:.:||.:|:.|:.:| ..:.|:...||||||.|..:::|:.
Frog 68 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-NQNCDDVCRILVGNKNDDPERKVVE 131
Fly 146 FERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESL 190
.|...:.|.|:.::.||||||||:||:.:|..:.:::.....::|
Frog 132 TEDAYKFAAQMDIQLFETSAKENLNVEEMFNCITELVLRAKKDNL 176
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rab3 | NP_001356961.1 |
Rab3 |
21..185 |
CDD:206657 |
79/163 (48%) |
rab35 | NP_989019.1 |
Rab35 |
3..201 |
CDD:133310 |
81/175 (46%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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