DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab3 and Rab19

DIOPT Version :10

Sequence 1:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster


Alignment Length:214 Identity:81/214 - (37%)
Similarity:131/214 - (61%) Gaps:24/214 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAG 79
            :::||::||:::||:...|||..:.|:...::.....:|:|:||.:||:....|::|||||||||
  Fly    15 EEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAG 79

  Fly    80 QERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVI 144
            |||:||||.:|||.|.|.:::||:|...||:::|.|:.:::.|:..|..:||||||||:|:||.:
  Fly    80 QERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREV 144

  Fly   145 SFERGRQLADQLGVEFF--ETSAKENVNVKAVFERLVDIICDKMSESLDA-------DPTLVGGG 200
            .||..||:...:....|  |||||||:||:..|.    .:.:::....||       :.|:..| 
  Fly   145 DFEEARQMCQYIPEILFVMETSAKENMNVEDAFR----CLANELKRQHDANNVEEVPENTITLG- 204

  Fly   201 QKGQRLTDQPQGTPNANCN 219
                      ||.|..:|:
  Fly   205 ----------QGKPLKSCS 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab3NP_523687.1 Rab3 21..185 CDD:206657 71/165 (43%)
Rab19NP_523970.1 Rab19 19..184 CDD:133267 72/168 (43%)

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