Protein Alignment Rab3 and rab1ab

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001007162.1
• Gene: rab1ab / 368883
• ZFINID: ZDB-GENE-030616-564
• Length: 201
• Species: Danio rerio
• Alignment Length: 201
• Identity: 90/201 - (44%)
• Similarity: 137/201 - (68%)
• Gaps: 5/201 - (2%)

  Fly    18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 82
            :||:||||:||:|.|||:..|.|:|||::|.:::||:|:|||::|:....|.:||||||||||||
Zfish     5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69

  Fly    83 YRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFE 147
            :||||::|||||.|.|::||||:::|||:|:.|:.:|..|:.:|...:|||||||:..::|:.:.
Zfish    70 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYT 134

  Fly   148 RGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLVGGGQKGQRLTDQPQG 212
            ..::.||.||:.|.|||||...||:..|..:...|..:|.....|     ||.:|..::...|..
Zfish   135 TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATA-----GGSEKTMKIESTPVK 194

  Fly   213 TPNANC 218
            ..:..|
Zfish   195 PASGGC 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	81/163 (50%)
rab1ab	NP_001007162.1	Rab1_Ypt1	7..172	CDD:206661	82/164 (50%)