DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab3 and Rab32

DIOPT Version :10

Sequence 1:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster


Alignment Length:225 Identity:76/225 - (33%)
Similarity:122/225 - (54%) Gaps:17/225 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DPKWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKR- 69
            :|......:|:. ::::|:|:||....|||||:.||....|:..:.:|:|:||.:| |.:.|.. 
  Fly   469 EPAIMTSTSDKR-EHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALK-VLQWDANT 531

  Fly    70 -VKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQI--KTYSWDNAQV-- 129
             |:||:||.|||||:..:|..||:.|:|..:::|||...:|:.|..|...:  |....|.:.:  
  Fly   532 IVRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPC 596

  Fly   130 ILVGNKCDMEDQRVISF-ERGRQLADQLG-VEFFETSAKENVNVKAVFERLVD--IICDKMSESL 190
            ||:.||||.|.|.:|:. |:..:...:.| ..:||||||||:|:......||:  :|.||:   :
  Fly   597 ILLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL---I 658

  Fly   191 DADPTLVGGGQKGQRLTDQPQGTPNANCNC 220
            .||  |..|.:......|.........|:|
  Fly   659 SAD--LADGDKFNLSAADATGSDAKNKCSC 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab3NP_523687.1 Rab3 21..185 CDD:206657 65/173 (38%)
Rab32NP_525109.1 PHA03247 <126..481 CDD:223021 2/12 (17%)
Rab32_Rab38 484..686 CDD:206692 73/207 (35%)

Return to query results.
Submit another query.