Protein Alignment Rab3 and Rab6

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_477172.1
• Gene: Rab6 / 34636
• FlyBaseID: FBgn0015797
• Length: 208
• Species: Drosophila melanogaster
• Alignment Length: 230
• Identity: 86/230 - (37%)
• Similarity: 130/230 - (56%)
• Gaps: 32/230 - (13%)

  Fly     1 MASG--GDPKWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV 63
            |:||  |:|..:           |||:.:|..||||||.:.|:..|||.:.:.:|:||||..||:
  Fly     1 MSSGDFGNPLRK-----------FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTM 54

  Fly    64 FRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQ 128
            :..|:.|:||:||||||||:|::..:|.|.:...:::||:||.:||:....|:..::|....:..
  Fly    55 YLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVI 119

  Fly   129 VILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERL------VDIICDKMS 187
            ::|||||.|:.|:|.:|.|.|.:.|.:|.|.|.|||||...|||.:|.|:      :|...:|.|
  Fly   120 IMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPS 184

  Fly   188 ESLDADPTLVGGGQKGQRLTDQPQGT--PNANCNC 220
            |.:.   .:|        |.|.|..|  |...|.|
  Fly   185 EDMQ---EVV--------LKDSPNETKDPEGGCAC 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	70/169 (41%)
Rab6	NP_477172.1	Rab6	13..173	CDD:206654	69/159 (43%)