Protein Alignment Rab3 and Rab5

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_523457.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Alignment Length: 435
• Identity: 92/435 - (21%)
• Similarity: 134/435 - (30%)
• Gaps: 173/435 - (39%)

  Fly    24 ERTQDYSKLLEY----GLHKMVAGRLDDI----YKTGKLAHSELDERALDALKEFHVEGALDVLD 80
            |..:|:.|.:||    |.||  ||....|    :|..|..:.                  ||.||
  Fly    18 EEFKDFPKYIEYIESQGAHK--AGLAKIIPPPEWKPRKSGYD------------------LDSLD 62

  Fly    81 QFLDSNLEHVSNKSAFLCGVMKTYRQKVRATQQGQPAPAVTVQAKGPDEEKIKAIL---ER--TG 140
            ..:.|.:..|      :.|....|:|             :.:| |.|...|..|.|   ||  |.
  Fly    63 ITIPSPICQV------VAGKQGLYQQ-------------INIQ-KNPLTVKQFAELANTERYATP 107

  Fly   141 YTLDVTTGQRKYGGPPPNWTGNT---PGNGCEVFCGKIPKDMYEDELIPLFEKCGKIWD---LRL 199
            ...|....:|||      |...|   |..|.:| ||.|.            :|...||:   |..
  Fly   108 KHFDFEDLERKY------WKNITYVAPIYGADV-CGSIT------------DKDCNIWNINHLGT 153

  Fly   200 MMD--------PMTGTNRGYAF-----VTFT--SRDAASNAVRELNN------YEIKPGNCLKIN 243
            ::|        .:.|.|..|.:     .||.  :.|....::..|:.      |.:.|.:..|:.
  Fly   154 ILDFVDEDYGISIDGVNTAYLYFGMWKTTFAWHTEDMDLYSINYLHFGAPKTWYAVPPEHGRKLE 218

  Fly   244 VSVPN------------LR----------LFVGNIPKSKGKEE-----ILDEFGKLTAGLVEVII 281
            ....|            ||          |...|||..|..:|     |...|| ..||.
  Fly   219 KLARNSFPASHKTCPAFLRHKMTLISPQILKQHNIPYDKITQEENEIMITFPFG-YHAGF----- 277

  Fly   282 YSSPDDKKKNRGF-C----------FLEY-----ESHKAASLAK-------RRLGTGRIKVWNCD 323
                     |.|| |          ::||     :.:.::.:.|       :|....|.:.|
  Fly   278 ---------NHGFNCAESTNFAMPRWIEYGKRAAQCYCSSEMVKILMDTFVKRFQPDRYEAW--- 330

  Fly   324 IIVDWADPQEEPDEQTMSKVKVLYVRNLTQDTSEEKLKESFEQFG 368
              :|..|....|::.|    .:|.......|.|.::..|..|..|
  Fly   331 --MDGTDFGPHPEDPT----TILGPPPRILDASGDERDEGIEDGG 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	43/176 (24%)
Rab5	NP_523457.1	Rab5_related	29..191	CDD:206653	50/220 (23%)