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Protein Alignment Rab3 and Rab39
DIOPT Version :9
Sequence 1: | NP_001356961.1 |
Gene: | Rab3 / 36127 |
FlyBaseID: | FBgn0005586 |
Length: | 220 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001245568.1 |
Gene: | Rab39 / 31684 |
FlyBaseID: | FBgn0029959 |
Length: | 218 |
Species: | Drosophila melanogaster |
Alignment Length: | 167 |
Identity: | 66/167 - (39%) |
Similarity: | 105/167 - (62%) |
Gaps: | 6/167 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHD-KRVKLQIWDTAGQE 81
|:|.|:|::||:|:|||:|.|..:.|..|......|||:||..:.:...| .::|||:|||||||
Fly 6 FEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQE 70
Fly 82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVI-LVGNKCDMED---QR 142
|:|:||.:|||.::|.:|:||::|..||..:..|:.:.:.:...:..|. |||.|.|:.: .|
Fly 71 RFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINAGGHR 135
Fly 143 VISFERGRQLADQLGVEFFETSAKENVNVKAVFERLV 179
.::.|..::.|.|.|:.|.||||:...||:..| |:|
Fly 136 EVTTEEAQKFAKQHGLHFVETSARSGANVEEAF-RMV 171
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rab3 | NP_001356961.1 |
Rab3 |
21..185 |
CDD:206657 |
64/164 (39%) |
Rab39 | NP_001245568.1 |
Rab39 |
8..218 |
CDD:133311 |
65/165 (39%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45454262 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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