Protein Alignment Rab3 and Rab39

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_572405.2
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Alignment Length: 167
• Identity: 66/167 - (39%)
• Similarity: 105/167 - (62%)
• Gaps: 6/167 - (3%)

  Fly    18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHD-KRVKLQIWDTAGQE 81
            |:|.|:|::||:|:|||:|.|..:.|..|......|||:||..:.:...| .::|||:|||||||
  Fly     6 FEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDTAGQE 70

  Fly    82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVI-LVGNKCDMED---QR 142
            |:|:||.:|||.::|.:|:||::|..||..:..|:.:.:.:...:..|. |||.|.|:.:   .|
  Fly    71 RFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCKLDLINAGGHR 135

  Fly   143 VISFERGRQLADQLGVEFFETSAKENVNVKAVFERLV 179
            .::.|..::.|.|.|:.|.||||:...||:..| |:|
  Fly   136 EVTTEEAQKFAKQHGLHFVETSARSGANVEEAF-RMV 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	64/164 (39%)
Rab39	NP_572405.2	Rab39	8..218	CDD:133311	65/165 (39%)