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Protein Alignment Rab3 and Rab27
DIOPT Version :9
Sequence 1: | NP_001356961.1 |
Gene: | Rab3 / 36127 |
FlyBaseID: | FBgn0005586 |
Length: | 220 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_726743.1 |
Gene: | Rab27 / 31103 |
FlyBaseID: | FBgn0025382 |
Length: | 236 |
Species: | Drosophila melanogaster |
Alignment Length: | 174 |
Identity: | 74/174 - (42%) |
Similarity: | 117/174 - (67%) |
Gaps: | 9/174 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVF------RHDKRVKLQIWDTAGQE 81
:.|::|:|.||||..|::|.|..|.:.|:|||||||:.|.:. || |:.||||||||||
Fly 19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRH--RIHLQIWDTAGQE 81
Fly 82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSW-DNAQVILVGNKCDMEDQRVIS 145
|:|::|||:||.||||:|::|:|:|.||....:|::|::|::: ::..|:|.|||||:...||:|
Fly 82 RFRSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLRVVS 146
Fly 146 FERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSES 189
.::...|..:..:.:.||||....|||...|.||..:.:::..:
Fly 147 RDQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIENA 190
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45454271 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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