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Protein Alignment Rab3 and Rab8b
DIOPT Version :9
Sequence 1: | NP_001356961.1 |
Gene: | Rab3 / 36127 |
FlyBaseID: | FBgn0005586 |
Length: | 220 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038936858.1 |
Gene: | Rab8b / 266688 |
RGDID: | 628764 |
Length: | 208 |
Species: | Rattus norvegicus |
Alignment Length: | 189 |
Identity: | 94/189 - (49%) |
Similarity: | 142/189 - (75%) |
Gaps: | 2/189 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQ 80
:.:||:||||:||:|.||||..|||:::|:|.:.|:||:|||||::|:....|::||||||||||
Rat 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67
Fly 81 ERYRTITTAYYRGAM-GFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVI 144
||:|||||||||||| |.:|:||:|||.||:::::|:..|:.::..:.:.:::||||||.|:|.:
Rat 68 ERFRTITTAYYRGAMQGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQV 132
Fly 145 SFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESL-DADPTLVGGGQK 202
|.|||.:||...|::|.|||||.:.||:..|..|...|..|::..: |::.:..||..|
Rat 133 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVK 191
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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