Protein Alignment Rab3 and Rab3a

DIOPT Version :9

• Sequence 1: NP_001356961.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_037150.2
• Gene: Rab3a / 25531
• RGDID: 3528
• Length: 220
• Species: Rattus norvegicus
• Alignment Length: 222
• Identity: 174/222 - (78%)
• Similarity: 199/222 - (89%)
• Gaps: 4/222 - (1%)

  Fly     1 MASGGDPKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVF 64
            |||..|.:: ||:::|||||||||:|||||||||||||||||||||||.||||||||||||||::
  Rat     1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIY 65

  Fly    65 RHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQV 129
            |:|||:||||||||||||||||||||||||||||||||:|||:|||:||||.|||||||||||||
  Rat    66 RNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV 130

  Fly   130 ILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLD-AD 193
            :||||||||||:||:|.||||||||.||.||||.|||:|:|||..||||||:||:||||||| ||
  Rat   131 LLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTAD 195

  Fly   194 PTLVGGGQKGQRLTDQPQGTPNANCNC 220
            |. |.|.::|.:|||| |..|:.:|.|
  Rat   196 PA-VTGAKQGPQLTDQ-QAPPHQDCAC 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_001356961.1	Rab3	21..185	CDD:206657	141/163 (87%)
Rab3a	NP_037150.2	Rab3	22..186	CDD:206657	141/163 (87%)
		Effector region. /evidence=ECO:0000250	51..59		7/7 (100%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	194..220		13/27 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	292	1.000	Domainoid score	I1467
eggNOG	1	0.900	-	-		E1_KOG0093
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	353	1.000	Inparanoid score	I2183
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D503770at33208
OrthoFinder	1	1.000	-	-		FOG0000908
OrthoInspector	1	1.000	-	-		otm45169
orthoMCL	1	0.900	-	-		OOG6_105135
Panther	1	1.100	-	-	O	PTHR47980
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X578
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	13	12.830