Protein Alignment Rab3 and ypt4

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_594796.1
• Gene: ypt4 / 2542113
• PomBaseID: SPAC1B3.11C
• Length: 234
• Species: Schizosaccharomyces pombe
• Alignment Length: 184
• Identity: 66/184 - (35%)
• Similarity: 107/184 - (58%)
• Gaps: 6/184 - (3%)

  Fly    16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVF----RHDKRVKLQIWD 76
            :::||:.|:::.|.|..||:..|.|:..:.:......||||||..:.:.    ...||:||||||
pombe     4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWD 68

  Fly    77 TAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQ 141
            |||||::|::...|||||.|.:|:|||||:|||..:..|::.|:..:.....|:|.|:|.|:::|
pombe    69 TAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQ 133

  Fly   142 RVISFERGRQLADQLGV-EFFETSAKENVNVKAVFERLVDIICDKMSESLDADP 194
            |.:|.|...:...:..: ...|||:....||:..|..:|..|..:: |..:.||
pombe   134 RQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRI-ELGEIDP 186

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	61/168 (36%)
ypt4	NP_594796.1	RAB	10..178	CDD:197555	61/167 (37%)