DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab3 and Rab7b

DIOPT Version :10

Sequence 1:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_006529491.1 Gene:Rab7b / 226421 MGIID:2442295 Length:257 Species:Mus musculus


Alignment Length:164 Identity:59/164 - (35%)
Similarity:95/164 - (57%) Gaps:14/164 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTIT 87
            ||:|:|...|||||.|.:|...:|...:.:|:|.....|.:...|..:|||||||.||||:|::.
Mouse    68 KLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQIWDTGGQERFRSMV 132

  Fly    88 TAYYRGAMGFILMYDVTNEDSFNSVQDW--------VTQIKTYSWDNAQVILVGNKCDMEDQRVI 144
            :.:|:|:.|.||.:|||:.:||.::..|        :...::|     .::::|||.|:||::| 
Mouse   133 STFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPMEQSY-----PMVVLGNKIDLEDRKV- 191

  Fly   145 SFERGRQLADQLGVEFFETSAKENVNVKAVFERL 178
            |.|.......:..:.:||.|||.::||...||.|
Mouse   192 SQEVVHGWCKEKDMPYFEVSAKNDINVVQAFEVL 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab3NP_523687.1 Rab3 21..185 CDD:206657 59/164 (36%)
Rab7bXP_006529491.1 Rab 67..227 CDD:206640 59/164 (36%)

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