Protein Alignment Rab3 and Rab12

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_077768.3
• Gene: Rab12 / 19328
• MGIID: 894284
• Length: 291
• Species: Mus musculus
• Alignment Length: 229
• Identity: 94/229 - (41%)
• Similarity: 140/229 - (61%)
• Gaps: 23/229 - (10%)

  Fly     3 SGGDPKWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHD 67
            |||..:.:|. ..:..|:..:::|||:..|||||.:.|:.||:|..|..||||:|||:|||....
Mouse    72 SGGQARRRKQ-PPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG 135

  Fly    68 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILV 132
            |:::|||||||||||:.:||:||||.|.|.||:||:|.:::|:.:..|:..|..|:.::|:::||
Mouse   136 KKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLV 200

  Fly   133 GNKCDMEDQRVISFERGRQLADQL-GVEFFETSAKENVNVKAVFERLVDIICDKM------SE-- 188
            |||.|.|..|.||.::|.:.|.|: |:.|.|.|||:|.||..:|.:|||.|..||      :|
Mouse   201 GNKLDCETDREISRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVLRNELS 265

  Fly   189 ----SLDADPTLVGGGQKGQRLTDQPQGTPNANC 218
                ||..:|.:.         .:.|...|:..|
Mouse   266 NSILSLQPEPEIP---------PELPPPRPHVRC 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	80/164 (49%)
Rab12	NP_077768.3	Rab12	90..291	CDD:206699	89/210 (42%)