Protein Alignment Rab3 and Rab1a

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_033022.1
• Gene: Rab1a / 19324
• MGIID: 97842
• Length: 205
• Species: Mus musculus
• Alignment Length: 202
• Identity: 90/202 - (44%)
• Similarity: 136/202 - (67%)
• Gaps: 6/202 - (2%)

  Fly    18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 82
            :||:||||:||:|.|||:..|.|:|||::|.:::||:|:|||::|:....|.:||||||||||||
Mouse     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72

  Fly    83 YRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFE 147
            :||||::|||||.|.|::||||:::|||:|:.|:.:|..|:.:|...:|||||||:..::|:.:.
Mouse    73 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYT 137

  Fly   148 RGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLVGGGQKGQ-RLTDQPQ 211
            ..::.||.||:.|.|||||...||:..|..:...|..:|.....|     ||.:|.. ::...|.
Mouse   138 TAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA-----GGAEKSNVKIQSTPV 197

  Fly   212 GTPNANC 218
            ......|
Mouse   198 KQSGGGC 204

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	81/163 (50%)
Rab1a	NP_033022.1	Rab1_Ypt1	10..175	CDD:206661	82/164 (50%)
		Switch 1. /evidence=ECO:0000250|UniProtKB:P62820	34..48		5/13 (38%)
		Switch 2. /evidence=ECO:0000250|UniProtKB:P62820	66..83		13/16 (81%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	178..205		6/32 (19%)