Protein Alignment Rab3 and rab-28

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_501609.1
• Gene: rab-28 / 189429
• WormBaseID: WBGene00004281
• Length: 248
• Species: Caenorhabditis elegans
• Alignment Length: 219
• Identity: 67/219 - (30%)
• Similarity: 115/219 - (52%)
• Gaps: 15/219 - (6%)

  Fly    10 QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQ 73
            :.|..|...|.:.|::::|:.:.||||...|:|.:||..::..|:|:||..:.: ..|:.:|.:|
 Worm    24 EADVDDDPDDKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQ 88

  Fly    74 IWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIK--TYSWDN-AQVILVGNK 135
            :||..||.....:...|..||....|:|||||..||.:..||::.:|  |.|.:. .:::|:|||
 Worm    89 VWDIGGQSIAGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNK 153

  Fly   136 CDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLV-DIICDKMSES-LDADPTLVG 198
            .|:|::||:|.|..:..|....:.....|||....|...|.:.| :::...:|.: ::||..:|.
 Worm   154 TDLEERRVVSVEAHKNFATSNDMMPTYVSAKTGDTVFLTFRQAVAEVLNVGLSRAEVEADIEIVQ 218

  Fly   199 GGQKGQ---------RLTDQPQGT 213
            |....|         |.:||.:.|
 Worm   219 GSVIEQPKQSDASYARRSDQSRST 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	54/168 (32%)
rab-28	NP_501609.1	Rab28	36..248	CDD:206694	64/207 (31%)