Protein Alignment Rab3 and rabr-4

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_507083.1
• Gene: rabr-4 / 184330
• WormBaseID: WBGene00008671
• Length: 201
• Species: Caenorhabditis elegans
• Alignment Length: 168
• Identity: 62/168 - (36%)
• Similarity: 103/168 - (61%)
• Gaps: 0/168 - (0%)

  Fly    19 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERY 83
            |:|||.:|||:..|||::.|.|:.|:.|.....:|:|::|..|.:.....:|:|::|||.|||.:
 Worm     4 DHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQENF 68

  Fly    84 RTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFER 148
            |:|..||||.|:|.:|:||:|...||..::.|::.::.:......::|:|||.|::..|.::.|.
 Worm    69 RSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDLKAVRDVTTEE 133

  Fly   149 GRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKM 186
            |...|.:.|:.|.|||||.|.:|:..|......|..|:
 Worm   134 GEAFAKKNGLTFMETSAKANKHVEKAFVNTAHEIYKKL 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	60/163 (37%)
rabr-4	NP_507083.1	P-loop containing Nucleoside Triphosphate Hydrolases	5..170	CDD:476819	60/164 (37%)