Protein Alignment Rab3 and rabr-1

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_508455.2
• Gene: rabr-1 / 180554
• WormBaseID: WBGene00019317
• Length: 218
• Species: Caenorhabditis elegans
• Alignment Length: 179
• Identity: 70/179 - (39%)
• Similarity: 124/179 - (69%)
• Gaps: 2/179 - (1%)

  Fly    17 NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
            :::::||::::|:.:.||:..|.|:|::||....:||:|:|||:||:.....:::|::|||||.|
 Worm     2 SYNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGME 66

  Fly    82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQVILVGNKCDMEDQRVIS 145
            |||||..:||..|.|.:.:||:|||.||.:::. |:.:||.::..||.::|||||.||:.:|.:.
 Worm    67 RYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVD 131

  Fly   146 FERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSE-SLDAD 193
            |:|..:||.:|||..:|.|||..:|.:..|..|...:.::::. |:.:|
 Worm   132 FDRAEKLASRLGVSLYEVSAKTGINCEEAFHTLTAAMRERITAGSMHSD 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	68/164 (41%)
rabr-1	NP_508455.2	Rab	7..165	CDD:206640	67/157 (43%)