Protein Alignment Rab3 and rab-35

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_499454.1
• Gene: rab-35 / 176560
• WormBaseID: WBGene00004284
• Length: 209
• Species: Caenorhabditis elegans
• Alignment Length: 213
• Identity: 92/213 - (43%)
• Similarity: 144/213 - (67%)
• Gaps: 11/213 - (5%)

  Fly    13 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDT 77
            |..:::|::|||||||:|.|||:|.|.|:||::|:..:::|:|:|||::|:..:.:|||||||||
 Worm     2 AGTRDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDT 66

  Fly    78 AGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQR 142
            |||||:||||:.||||..|.:::|||||.:||.:|:.|:.:|:. :.|:.|.:||||||:..::|
 Worm    67 AGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIEN-NCDSVQKVLVGNKCEENERR 130

  Fly   143 VISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICD-KMS--ESLDADPTLVGGGQKGQ 204
            |:.....|..|..:.:.||||||||:.||:.:|..:..::.. |::  :|...|.:..|    |.
 Worm   131 VVLESDARNYAQSMNISFFETSAKEDKNVEPMFTCITSLVLTAKLANPQSASKDQSRTG----GV 191

  Fly   205 RLTDQPQGTPN--ANCNC 220
            .|.|. .|:.|  ..|.|
 Worm   192 SLKDN-SGSTNQKKKCKC 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	79/164 (48%)
rab-35	NP_499454.1	Rab35	5..208	CDD:133310	90/208 (43%)