DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab3 and Rab23

DIOPT Version :10

Sequence 1:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_061512129.1 Gene:Rab23 / 1271192 VectorBaseID:AGAMI1_000298 Length:223 Species:Anopheles gambiae


Alignment Length:188 Identity:66/188 - (35%)
Similarity:105/188 - (55%) Gaps:8/188 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAG 79
            ::..:...|::::||..|||||.:.||....:|..:..|:|:||..:.:....:.:::.:|||||
Mosquito     3 EEELEIALKVIVVGNGGVGKTSMVQRYCKGIYTKDYKKTIGVDFLERQIEIDGEDIRIMLWDTAG 67

  Fly    80 QERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVI 144
            ||.:..||.||||||...:|.:..|:..||.::::|..:::. .......:||.||.|:.||.|:
Mosquito    68 QEEFDAITKAYYRGAQACVLTFSTTDRASFEAIREWKRKVEN-ECSEIPTVLVQNKIDLMDQAVV 131

  Fly   145 SFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKM-----SESLD-ADPTL 196
            |||....||..||.....||.||:|||..|| |.:...|.:|     |:|.. :.||:
Mosquito   132 SFEEAEALAYSLGCRLIRTSVKEDVNVATVF-RYLATKCHQMMKQQYSQSAPISQPTI 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab3NP_523687.1 Rab3 21..185 CDD:206657 61/163 (37%)
Rab23XP_061512129.1 None

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